STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIR19007.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa)    
Predicted Functional Partners:
OIR19008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OIR20774.1
Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.701
OIR20856.1
Ribose 5-phosphate isomerase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.684
OIR20850.1
Bifunctional phosphoglucose/phosphomannose isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.678
OIR20104.1
Pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.674
OIR19005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.635
OIR19044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
OIR19006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.634
OIR18486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.634
OIR20052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.586
Your Current Organism:
Marine Group III
NCBI taxonomy Id: 1888995
Other names: M. Group III euryarchaeote CG-Epi1, Marine Group III euryarchaeote CG-Epi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.