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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB04555.1Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
  
 0.964
ANB09380.1
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.930
ANB08160.1
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.928
ANB04554.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.917
ANB04556.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
ygfU-2
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.480
ygfU
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.464
ANB04485.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.418
uox
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
     0.403
pucI
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.402
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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