ANB05189.1 protein (Streptomyces ambofaciens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ANB05189.1

Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)

Predicted Functional Partners:

ANB07827.1

0.545

tufB

0.537

gbh

0.474

ANB06681.1

0.448

ANB06350.1

0.422

pyrG

0.406

Your Current Organism:

Streptomyces ambofaciens

NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANB05189.1	ANB06350.1	SAM40697_1229	SAM40697_2391	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
ANB05189.1	ANB06681.1	SAM40697_1229	SAM40697_2723	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
ANB05189.1	ANB07827.1	SAM40697_1229	SAM40697_3869	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.545
ANB05189.1	gbh	SAM40697_1229	SAM40697_2568	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.	0.474
ANB05189.1	pyrG	SAM40697_1229	SAM40697_1648	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.406
ANB05189.1	tufB	SAM40697_1229	SAM40697_1230	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.537
ANB06350.1	ANB05189.1	SAM40697_2391	SAM40697_1229	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
ANB06350.1	ANB06681.1	SAM40697_2391	SAM40697_2723	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ANB06681.1	ANB05189.1	SAM40697_2723	SAM40697_1229	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
ANB06681.1	ANB06350.1	SAM40697_2723	SAM40697_2391	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ANB07827.1	ANB05189.1	SAM40697_3869	SAM40697_1229	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.545
ANB07827.1	pyrG	SAM40697_3869	SAM40697_1648	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.625
ANB07827.1	tufB	SAM40697_3869	SAM40697_1230	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.428
gbh	ANB05189.1	SAM40697_2568	SAM40697_1229	Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
pyrG	ANB05189.1	SAM40697_1648	SAM40697_1229	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
pyrG	ANB07827.1	SAM40697_1648	SAM40697_3869	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
tufB	ANB05189.1	SAM40697_1230	SAM40697_1229	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
tufB	ANB07827.1	SAM40697_1230	SAM40697_3869	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428

Server load: medium (58%) [HD]

Permalink

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About