nfo protein (Streptomyces ambofaciens) - STRING interaction network

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Score

nfo

Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (299 aa)

Predicted Functional Partners:

ung-2

0.971

ANB09446.1

0.884

ANB06899.1

0.880

ANB05965.1

0.703

ANB05966.1

0.703

thiG

0.703

spk

0.684

pyrF

0.668

ANB05964.1

0.664

cbiF

0.659

Your Current Organism:

Streptomyces ambofaciens

NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANB05964.1	ANB05965.1	SAM40697_2004	SAM40697_2005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ANB05964.1	ANB05966.1	SAM40697_2004	SAM40697_2006	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ANB05964.1	ANB06899.1	SAM40697_2004	SAM40697_2941	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
ANB05964.1	ANB09446.1	SAM40697_2004	SAM40697_5490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
ANB05964.1	nfo	SAM40697_2004	SAM40697_2009	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	0.664
ANB05964.1	spk	SAM40697_2004	SAM40697_2008	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
ANB05964.1	thiG	SAM40697_2004	SAM40697_2007	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.	0.776
ANB05965.1	ANB05964.1	SAM40697_2005	SAM40697_2004	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ANB05965.1	ANB05966.1	SAM40697_2005	SAM40697_2006	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
ANB05965.1	nfo	SAM40697_2005	SAM40697_2009	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	0.703
ANB05965.1	spk	SAM40697_2005	SAM40697_2008	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
ANB05965.1	thiG	SAM40697_2005	SAM40697_2007	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.	0.999
ANB05966.1	ANB05964.1	SAM40697_2006	SAM40697_2004	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ANB05966.1	ANB05965.1	SAM40697_2006	SAM40697_2005	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
ANB05966.1	nfo	SAM40697_2006	SAM40697_2009	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	0.703
ANB05966.1	spk	SAM40697_2006	SAM40697_2008	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
ANB05966.1	thiG	SAM40697_2006	SAM40697_2007	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.	0.999
ANB06899.1	ANB05964.1	SAM40697_2941	SAM40697_2004	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
ANB06899.1	ANB09446.1	SAM40697_2941	SAM40697_5490	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANB06899.1	nfo	SAM40697_2941	SAM40697_2009	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	0.880

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