| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANB04464.1 | rph | SAM40697_0502 | SAM40697_2692 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.872 |
| ANB06194.1 | ANB07544.1 | SAM40697_2234 | SAM40697_3586 | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.872 |
| ANB06194.1 | ANB09188.1 | SAM40697_2234 | SAM40697_5232 | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| ANB06194.1 | rph | SAM40697_2234 | SAM40697_2692 | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.800 |
| ANB06194.1 | rpsA | SAM40697_2234 | SAM40697_1890 | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.872 |
| ANB06194.1 | rpsD | SAM40697_2234 | SAM40697_1383 | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
| ANB06194.1 | rpsK | SAM40697_2234 | SAM40697_4073 | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.997 |
| ANB06649.1 | ANB06652.1 | SAM40697_2690 | SAM40697_2693 | dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.673 |
| ANB06649.1 | rph | SAM40697_2690 | SAM40697_2692 | dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.990 |
| ANB06652.1 | ANB06649.1 | SAM40697_2693 | SAM40697_2690 | PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.673 |
| ANB06652.1 | rph | SAM40697_2693 | SAM40697_2692 | PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.784 |
| ANB07544.1 | ANB06194.1 | SAM40697_3586 | SAM40697_2234 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.872 |
| ANB07544.1 | ANB09188.1 | SAM40697_3586 | SAM40697_5232 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| ANB07544.1 | rph | SAM40697_3586 | SAM40697_2692 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.802 |
| ANB07544.1 | rpsD | SAM40697_3586 | SAM40697_1383 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
| ANB07544.1 | rpsK | SAM40697_3586 | SAM40697_4073 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
| ANB09188.1 | ANB06194.1 | SAM40697_5232 | SAM40697_2234 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| ANB09188.1 | ANB07544.1 | SAM40697_5232 | SAM40697_3586 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| ANB09188.1 | rph | SAM40697_5232 | SAM40697_2692 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.991 |
| ANB09188.1 | rpsA | SAM40697_5232 | SAM40697_1890 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.965 |
STRING v12.5 is now available!
