Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANB06489.1 | ytnA | SAM40697_2530 | SAM40697_2701 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| ANB06661.1 | clpS | SAM40697_2702 | SAM40697_2703 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.908 |
| ANB06661.1 | cysM | SAM40697_2702 | SAM40697_2698 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.655 |
| ANB06661.1 | mec | SAM40697_2702 | SAM40697_2700 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| ANB06661.1 | ytnA | SAM40697_2702 | SAM40697_2701 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.488 |
| ANB08332.1 | ytnA | SAM40697_4374 | SAM40697_2701 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| clpS | ANB06661.1 | SAM40697_2703 | SAM40697_2702 | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
| clpS | cysM | SAM40697_2703 | SAM40697_2698 | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.624 |
| clpS | mec | SAM40697_2703 | SAM40697_2700 | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.652 |
| clpS | ytnA | SAM40697_2703 | SAM40697_2701 | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
| cysM | ANB06661.1 | SAM40697_2698 | SAM40697_2702 | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.655 |
| cysM | clpS | SAM40697_2698 | SAM40697_2703 | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.624 |
| cysM | mec | SAM40697_2698 | SAM40697_2700 | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
| cysM | ytnA | SAM40697_2698 | SAM40697_2701 | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| mec | ANB06661.1 | SAM40697_2700 | SAM40697_2702 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| mec | clpS | SAM40697_2700 | SAM40697_2703 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.652 |
| mec | cysM | SAM40697_2700 | SAM40697_2698 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
| mec | ytnA | SAM40697_2700 | SAM40697_2701 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| ytnA | ANB06489.1 | SAM40697_2701 | SAM40697_2530 | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| ytnA | ANB06661.1 | SAM40697_2701 | SAM40697_2702 | Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.488 |
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