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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaPPotassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)    
Predicted Functional Partners:
ANB06908.1
Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.731
ANB06910.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
mscL
Mechanosensitive ion channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
     
 0.617
ANB06911.1
Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
  
    0.572
ANB09746.1
Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.478
ask
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.
      
 0.471
trkA
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.446
trkA-2
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.426
ANB06912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
ANB09011.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.