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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB06925.1Extradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
ANB06926.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.865
ANB06929.1
M6 family metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.686
ANB06072.1
Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.602
ANB09942.1
Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
  
 0.576
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.558
ANB07461.1
Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
  
 0.528
ANB05108.1
Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
  
 0.511
ANB06217.1
Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
  
 0.448
ANB07211.1
5-amino-6-(5-phosphoribosylamino)uracil reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.441
sseB
3-mercaptopyruvate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.436
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.