ANB07094.1 protein (Streptomyces ambofaciens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

ANB07094.1

Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)

Predicted Functional Partners:

ANB07085.1

0.999

ANB07095.1

0.999

ANB07096.1

0.998

ANB07092.1

0.997

ANB07091.1

0.996

ANB07086.1

0.984

ANB07093.1

0.971

ANB07097.1

0.970

ANB04596.1

0.950

ANB07083.1

0.897

Your Current Organism:

Streptomyces ambofaciens

NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANB04596.1	ANB07085.1	SAM40697_0634	SAM40697_3127	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
ANB04596.1	ANB07086.1	SAM40697_0634	SAM40697_3128	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.849
ANB04596.1	ANB07091.1	SAM40697_0634	SAM40697_3133	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.849
ANB04596.1	ANB07094.1	SAM40697_0634	SAM40697_3136	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
ANB04596.1	ANB07095.1	SAM40697_0634	SAM40697_3137	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate J family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
ANB07083.1	ANB07085.1	SAM40697_3125	SAM40697_3127	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
ANB07083.1	ANB07086.1	SAM40697_3125	SAM40697_3128	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
ANB07083.1	ANB07091.1	SAM40697_3125	SAM40697_3133	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
ANB07083.1	ANB07092.1	SAM40697_3125	SAM40697_3134	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
ANB07083.1	ANB07093.1	SAM40697_3125	SAM40697_3135	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
ANB07083.1	ANB07094.1	SAM40697_3125	SAM40697_3136	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
ANB07083.1	ANB07095.1	SAM40697_3125	SAM40697_3137	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate J family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
ANB07083.1	ANB07096.1	SAM40697_3125	SAM40697_3138	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
ANB07083.1	ANB07097.1	SAM40697_3125	SAM40697_3139	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
ANB07085.1	ANB04596.1	SAM40697_3127	SAM40697_0634	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
ANB07085.1	ANB07083.1	SAM40697_3127	SAM40697_3125	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
ANB07085.1	ANB07086.1	SAM40697_3127	SAM40697_3128	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ANB07085.1	ANB07091.1	SAM40697_3127	SAM40697_3133	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
ANB07085.1	ANB07092.1	SAM40697_3127	SAM40697_3134	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ANB07085.1	ANB07093.1	SAM40697_3127	SAM40697_3135	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931

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