| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANB04190.1 | ANB07544.1 | SAM40697_0227 | SAM40697_3586 | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| ANB04190.1 | hrpA | SAM40697_0227 | SAM40697_3261 | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
| ANB04190.1 | rpsA | SAM40697_0227 | SAM40697_1890 | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| ANB04190.1 | rpsQ | SAM40697_0227 | SAM40697_4056 | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.770 |
| ANB07544.1 | ANB04190.1 | SAM40697_3586 | SAM40697_0227 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| ANB07544.1 | ANB09188.1 | SAM40697_3586 | SAM40697_5232 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| ANB07544.1 | hrpA | SAM40697_3586 | SAM40697_3261 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.840 |
| ANB07544.1 | ppiA | SAM40697_3586 | SAM40697_0583 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.422 |
| ANB07544.1 | rph | SAM40697_3586 | SAM40697_2692 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.802 |
| ANB07544.1 | rpsD | SAM40697_3586 | SAM40697_1383 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
| ANB07544.1 | rpsE | SAM40697_3586 | SAM40697_4064 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.994 |
| ANB07544.1 | rpsK | SAM40697_3586 | SAM40697_4073 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
| ANB07544.1 | rpsQ | SAM40697_3586 | SAM40697_4056 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.990 |
| ANB09188.1 | ANB07544.1 | SAM40697_5232 | SAM40697_3586 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| ANB09188.1 | hrpA | SAM40697_5232 | SAM40697_3261 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.944 |
| ANB09188.1 | rph | SAM40697_5232 | SAM40697_2692 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.991 |
| ANB09188.1 | rpsA | SAM40697_5232 | SAM40697_1890 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.965 |
| ANB09188.1 | rpsD | SAM40697_5232 | SAM40697_1383 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.979 |
| ANB09188.1 | rpsE | SAM40697_5232 | SAM40697_4064 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.730 |
| ANB09188.1 | rpsK | SAM40697_5232 | SAM40697_4073 | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.977 |
STRING v12.5 is now available!
