Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vapCTwitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (147 aa)    
Predicted Functional Partners:
ANB07540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.877
ANB07538.1
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.710
ANB07990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
ANB07825.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
ANB04563.1
Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
ANB06711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
ANB09859.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
ANB08357.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
ANB06957.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
ANB09117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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