oppD-2 protein (Streptomyces ambofaciens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

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[Homology]

Score

oppD-2

Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (345 aa)

Predicted Functional Partners:

ANB10597.1

0.965

ANB09610.1

0.964

ANB08373.1

0.963

ANB08371.1

0.949

ANB09476.1

0.948

ANB08376.1

0.941

yliD

0.936

ANB09474.1

0.922

ANB08364.1

0.921

ANB08375.1

0.891

Your Current Organism:

Streptomyces ambofaciens

NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANB08364.1	ANB08371.1	SAM40697_4406	SAM40697_4413	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
ANB08364.1	ANB08375.1	SAM40697_4406	SAM40697_4417	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
ANB08364.1	ANB09476.1	SAM40697_4406	SAM40697_5520	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
ANB08364.1	ANB09610.1	SAM40697_4406	SAM40697_5654	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
ANB08364.1	oppD-2	SAM40697_4406	SAM40697_4412	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.921
ANB08371.1	ANB08364.1	SAM40697_4413	SAM40697_4406	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
ANB08371.1	ANB08373.1	SAM40697_4413	SAM40697_4415	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
ANB08371.1	ANB08376.1	SAM40697_4413	SAM40697_4418	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
ANB08371.1	ANB09474.1	SAM40697_4413	SAM40697_5518	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
ANB08371.1	ANB09476.1	SAM40697_4413	SAM40697_5520	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
ANB08371.1	ANB09610.1	SAM40697_4413	SAM40697_5654	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.644
ANB08371.1	ANB10597.1	SAM40697_4413	SAM40697_6644	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
ANB08371.1	oppD-2	SAM40697_4413	SAM40697_4412	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.949
ANB08371.1	yliD	SAM40697_4413	SAM40697_4730	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
ANB08373.1	ANB08371.1	SAM40697_4415	SAM40697_4413	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
ANB08373.1	ANB08375.1	SAM40697_4415	SAM40697_4417	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
ANB08373.1	ANB09476.1	SAM40697_4415	SAM40697_5520	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
ANB08373.1	ANB09610.1	SAM40697_4415	SAM40697_5654	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
ANB08373.1	oppD-2	SAM40697_4415	SAM40697_4412	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.963
ANB08375.1	ANB08364.1	SAM40697_4417	SAM40697_4406	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894

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