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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB08527.1Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
ANB08525.1
Multi-component regulatory system-8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.842
ANB08523.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.833
ANB08524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.833
ANB08526.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.833
ANB04497.1
Chitin-binding protein; Involved in chitin degradation. Catalyzes the oxidative cleavage of glycosidic bonds in chitin via a copper-dependent mechanism, leading to oxidized chitooligomers with degrees of polymerization of 4-6. Is not active on cellulose.
      
 0.651
ANB05072.1
Chitin-binding protein; Involved in the degradation of lignocellulosic biomass. Catalyzes the oxidative cleavage of glycosidic bonds in cellulosic substrates via a copper-dependent mechanism. Degrades phosphoric acid swollen cellulose (PASC) to oxidized cellooligosaccharides with degrees of polymerization of 4-8. Also shows activity on agricultural fiber paper pulps such as flax pulp. Is not active on chitin.
      
 0.651
alpJ
Anthrone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.650
etfB
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.591
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
     
 0.578
kynU-2
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
     
 0.578
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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