STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK28209.1Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family. (337 aa)    
Predicted Functional Partners:
SEK28249.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  0.995
rbsA-2
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.991
SEL79504.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.988
rbsA
Rhamnose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.960
SEK99143.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.952
SEL07839.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.906
SEL07865.1
Rhamnose transport system ATP-binding protein.
 
  0.906
SEL79578.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.840
SEK47576.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.801
SEK21478.1
Rhamnose-binding protein.
 
  0.797
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.