STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK30782.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
SEK30827.1
Penicillin-insensitive murein endopeptidase.
       0.807
SEK30862.1
MFS transporter, UMF1 family.
       0.807
SEK30910.1
Acyl-CoA thioesterase FadM.
       0.693
SEK75620.1
Hypothetical protein.
  
     0.556
SEK30941.1
YggT family protein.
       0.549
SEL25186.1
Hypothetical protein.
  
     0.515
SEK71129.1
Hypothetical protein.
  
     0.497
SEL53557.1
Hypothetical protein.
  
     0.497
SEK35949.1
Hypothetical protein.
  
     0.453
SEK53676.1
4-carboxymuconolactone decarboxylase.
  
     0.448
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.