Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK42463.1 | SEK42503.1 | SAMN04488526_0542 | SAMN04488526_0543 | HupE / UreJ protein. | Uncharacterized conserved protein, contains GH25 family domain. | 0.922 |
SEK42463.1 | SEK65057.1 | SAMN04488526_0542 | SAMN04488526_1150 | HupE / UreJ protein. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.476 |
SEK42463.1 | leuD | SAMN04488526_0542 | SAMN04488526_0544 | HupE / UreJ protein. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.492 |
SEK42463.1 | ureB | SAMN04488526_0542 | SAMN04488526_2262 | HupE / UreJ protein. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.401 |
SEK42463.1 | ureG | SAMN04488526_0542 | SAMN04488526_2255 | HupE / UreJ protein. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.425 |
SEK42503.1 | SEK42463.1 | SAMN04488526_0543 | SAMN04488526_0542 | Uncharacterized conserved protein, contains GH25 family domain. | HupE / UreJ protein. | 0.922 |
SEK42503.1 | leuD | SAMN04488526_0543 | SAMN04488526_0544 | Uncharacterized conserved protein, contains GH25 family domain. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.671 |
SEK65057.1 | SEK42463.1 | SAMN04488526_1150 | SAMN04488526_0542 | precorrin-6Y C5,15-methyltransferase (decarboxylating). | HupE / UreJ protein. | 0.476 |
leuD | SEK42463.1 | SAMN04488526_0544 | SAMN04488526_0542 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | HupE / UreJ protein. | 0.492 |
leuD | SEK42503.1 | SAMN04488526_0544 | SAMN04488526_0543 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Uncharacterized conserved protein, contains GH25 family domain. | 0.671 |
ureB | SEK42463.1 | SAMN04488526_2262 | SAMN04488526_0542 | Urease subunit beta; Belongs to the urease beta subunit family. | HupE / UreJ protein. | 0.401 |
ureB | ureG | SAMN04488526_2262 | SAMN04488526_2255 | Urease subunit beta; Belongs to the urease beta subunit family. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.986 |
ureG | SEK42463.1 | SAMN04488526_2255 | SAMN04488526_0542 | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | HupE / UreJ protein. | 0.425 |
ureG | ureB | SAMN04488526_2255 | SAMN04488526_2262 | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.986 |