STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK61133.1Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (261 aa)    
Predicted Functional Partners:
SEK61087.1
Trehalose 6-phosphate synthase.
 
 0.999
SEL41422.1
Hypothetical protein.
   
    0.948
SEK64444.1
Catalase.
   
  
 0.746
SEL46544.1
AAA domain-containing protein.
    
 0.744
SEK88765.1
Alpha-glucosidase.
  
 
 0.576
SEK40572.1
UDP-glucose pyrophosphorylase.
    
 0.553
SEK88215.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
   
  
 0.542
SEK73579.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
    
 0.530
SEL80004.1
Response regulator receiver protein.
   
    0.516
SEK91948.1
Hypothetical protein.
   
    0.515
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.