STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK61804.1H-type lectin domain-containing protein. (116 aa)    
Predicted Functional Partners:
SEK64750.1
Sulfotransferase family protein.
  
     0.773
SEL24479.1
Hypothetical protein.
  
     0.772
SEK35949.1
Hypothetical protein.
  
     0.770
SEK64778.1
Core-2/I-Branching enzyme.
  
     0.770
SEK71129.1
Hypothetical protein.
  
     0.764
SEK23186.1
Hypothetical protein.
  
     0.755
SEL09490.1
Hypothetical protein.
  
     0.752
SEL34694.1
Hypothetical protein.
  
     0.749
SEL07482.1
Hypothetical protein.
  
     0.734
SEK35900.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.