STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK72328.1Manganese/iron transport system permease protein. (284 aa)    
Predicted Functional Partners:
SEK72364.1
Manganese/iron transport system ATP-binding protein.
 0.997
SEK72404.1
Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.997
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 0.938
SEK72285.1
Manganese/iron transport system permease protein.
 
  
 
0.928
SEK48789.1
Zinc transport system substrate-binding protein.
 
 
 0.787
SEK48714.1
Zinc transport system permease protein.
  
  
 
0.634
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.598
SEL14034.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.513
SEL44662.1
Sorbitol ABC transporter ATP-binding protein.
     
  0.468
SEL66031.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
     
  0.468
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.