STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL11260.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (503 aa)    
Predicted Functional Partners:
SEK49490.1
Hypothetical protein.
 
0.999
SEL41489.1
PAS/PAC sensor hybrid histidine kinase.
 0.999
SEL58275.1
Response regulator receiver modulated diguanylate cyclase.
 0.998
SEL81109.1
Methyl-accepting chemotaxis protein.
  
 0.996
SEK46954.1
PAS domain S-box-containing protein.
  
 0.992
SEL79918.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
  
 0.992
SEK32332.1
Serine phosphatase RsbU, regulator of sigma subunit; Manually curated.
 
 0.991
SEK50652.1
Signal transduction histidine kinase.
 
 0.988
SEL26359.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.987
SEK88429.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.986
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.