STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL30538.1Signal transduction histidine kinase. (453 aa)    
Predicted Functional Partners:
SEL41489.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.993
SEL26359.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.986
SEL30571.1
Response regulator receiver domain-containing protein.
  0.978
SEK49490.1
Hypothetical protein.
 
0.976
SEL30766.1
Two-component system, OmpR family, response regulator.
 
  0.899
SEL57272.1
Response regulator receiver domain-containing protein.
  
  0.859
SEK89629.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 
  0.855
SEK97871.1
Two-component system, OmpR family, response regulator.
 
  0.844
SEL41516.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.843
SEK33076.1
Two component transcriptional regulator, winged helix family.
 
  0.834
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.