Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL12755.1 | SEL41323.1 | SAMN04488526_2004 | SAMN04488526_2599 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Nucleotide-binding universal stress protein, UspA family. | 0.463 |
SEL27923.1 | SEL41323.1 | SAMN04488526_2334 | SAMN04488526_2599 | Polyphosphate kinase 2, PA0141 family. | Nucleotide-binding universal stress protein, UspA family. | 0.533 |
SEL41323.1 | SEL12755.1 | SAMN04488526_2599 | SAMN04488526_2004 | Nucleotide-binding universal stress protein, UspA family. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.463 |
SEL41323.1 | SEL27923.1 | SAMN04488526_2599 | SAMN04488526_2334 | Nucleotide-binding universal stress protein, UspA family. | Polyphosphate kinase 2, PA0141 family. | 0.533 |
SEL41323.1 | SEL41422.1 | SAMN04488526_2599 | SAMN04488526_2602 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.434 |
SEL41323.1 | SEL41458.1 | SAMN04488526_2599 | SAMN04488526_2603 | Nucleotide-binding universal stress protein, UspA family. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.455 |
SEL41422.1 | SEL41323.1 | SAMN04488526_2602 | SAMN04488526_2599 | Hypothetical protein. | Nucleotide-binding universal stress protein, UspA family. | 0.434 |
SEL41422.1 | SEL41458.1 | SAMN04488526_2602 | SAMN04488526_2603 | Hypothetical protein. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.895 |
SEL41458.1 | SEL41323.1 | SAMN04488526_2603 | SAMN04488526_2599 | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | Nucleotide-binding universal stress protein, UspA family. | 0.455 |
SEL41458.1 | SEL41422.1 | SAMN04488526_2603 | SAMN04488526_2602 | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | Hypothetical protein. | 0.895 |