STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL44441.1Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. (456 aa)    
Predicted Functional Partners:
SEL44470.1
4-hydroxybutyrate dehydrogenase.
 0.973
SEL44411.1
L-glutamine synthetase.
 
 
  0.945
SEL44370.1
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.872
SEK39957.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.864
SEL44315.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.863
SEK89582.1
Reductive dehalogenase.
 
 
 0.859
SEL44250.1
Transcriptional regulator, RpiR family.
 
 
  0.854
SEL44281.1
Predicted N-formylglutamate amidohydrolase.
 
     0.853
SEK45112.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.825
SEL44344.1
TRAP transporter, DctM subunit.
 
     0.814
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.