STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL44579.1Sorbitol ABC transporter membrane protein. (288 aa)    
Predicted Functional Partners:
SEL44545.1
Sorbitol-binding protein /mannitol-binding protein.
  0.998
SEL44618.1
Sorbitol ABC transporter membrane protein.
 0.998
SEL44662.1
Sorbitol ABC transporter ATP-binding protein.
 
  0.998
SEK62310.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.943
SEK88787.1
Maltose ABC transporter ATP-binding protein.
  
  0.933
SEK94892.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.928
SEK62145.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.926
SEL58761.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.905
SEL44713.1
Mannitol 2-dehydrogenase.
 
     0.897
SEK88725.1
Alpha-glucoside transport system permease protein.
 0.891
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.