STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL45655.1Chemotaxis protein CheD; Manually curated. (192 aa)    
Predicted Functional Partners:
SEK88429.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 
 0.987
SEL73432.1
Methyl-accepting chemotaxis protein.
 
  0.957
SEK88395.1
Purine-binding chemotaxis protein CheW.
 
 
 0.955
SEL81109.1
Methyl-accepting chemotaxis protein.
 
  0.954
SEK88352.1
Chemotaxis protein methyltransferase CheR; Non-canonical start codon; manually curated.
 
  
 0.940
SEL65279.1
Methyl-accepting chemotaxis protein.
 
  0.938
SEK44349.1
Flagellar biosynthetic protein FlhB.
 
  
 0.896
SEK44258.1
Flagellar biosynthesis protein FlhA.
 
  
 0.873
SEL41489.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.867
SEK42748.1
Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein.
 
  0.853
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.