STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL46921.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
SEL46862.1
DNA modification methylase.
 
     0.953
SEL46890.1
DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
       0.762
SEL46950.1
Protein of unknown function.
  
     0.761
SEL47012.1
Hypothetical protein.
 
     0.746
SEL46830.1
Hypothetical protein.
  
     0.739
SEL46771.1
Hypothetical protein.
  
     0.730
SEL47213.1
Hypothetical protein.
  
     0.716
SEL47246.1
Hypothetical protein.
  
     0.707
SEL47386.1
Hypothetical protein.
  
     0.678
SEL47351.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.