STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL48225.1Peptide/nickel transport system permease protein. (294 aa)    
Predicted Functional Partners:
SEL48303.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
 
  0.997
SEL48334.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.996
SEL31987.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.992
SEK45406.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.991
SEK45441.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.991
SEL10941.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.991
SEL10966.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.991
SEL48251.1
Peptide/nickel transport system permease protein.
 
 0.987
SEL71012.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.973
SEK22907.1
Microcin C transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.972
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.