STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL57720.1NitT/TauT family transport system permease protein. (331 aa)    
Predicted Functional Partners:
SEL57782.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.987
SEL57661.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.976
SEK91748.1
Taurine transport system substrate-binding protein.
  
 
 0.961
SEL57694.1
NitT/TauT family transport system permease protein.
 
  
 
0.908
SEL64872.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.819
tauB
Taurine transport system ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
 
 0.781
SEL57750.1
Hypothetical protein.
       0.773
SEL57809.1
Dihydropyrimidinase.
 
     0.685
SEL64834.1
NitT/TauT family transport system permease protein.
 
 
  0.664
SEL64809.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.639
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.