STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL79740.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (428 aa)    
Predicted Functional Partners:
SEL79796.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
SEL79773.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
SEL79828.1
Urea transport system ATP-binding protein.
 
  
 0.998
SEL79856.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
 0.996
SEL32185.1
Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains.
  
 
 0.962
SEL44015.1
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD.
 
      0.802
SEL57153.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.733
SEK37444.1
Rieske [2Fe-2S] domain-containing protein.
   
  
 0.725
SEK50409.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
   
 
  0.723
SEL28524.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
   
 
  0.723
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.