STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP97338.1Pfam:pfam01144 Coenzyme A transferase. (219 aa)    
Predicted Functional Partners:
AMP97337.1
Pfam:pfam01144 Coenzyme A transferase.
 0.999
AMQ01515.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.951
AMP99947.1
Hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like.
 
 
 0.938
AMP97353.1
Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.933
AMP98609.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
 0.926
AMQ01516.1
Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.866
AMP97336.1
Pfam:pfam07995 Glucose / Sorbosone dehydrogenase.
       0.636
AMP99855.1
Transketolase; Pfam:pfam02780 Transketolase, C-terminal domain.
  
 
 0.535
AMQ01446.1
Dehydrogenase; Pfam:pfam00676 Dehydrogenase E1 component.
  
 
 0.535
AMP97334.1
Putative lipoprotein; Pfam:pfam14129 Domain of unknown function (DUF4296).
       0.410
Your Current Organism:
Pedobacter cryoconitis
NCBI taxonomy Id: 188932
Other names: DSM 14825, LMG 21415, LMG:21415, P. cryoconitis, Pedobacter cryoconitis Margesin et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.