Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMP97998.1 | AMP97999.1 | AY601_1069 | AY601_1070 | Pfam:pfam02837 Glycosyl hydrolases family 2, sugar binding domain. | Hypothetical protein; Pfam:pfam01979 Amidohydrolase family. | 0.773 |
AMP97998.1 | AMP98000.1 | AY601_1069 | AY601_1071 | Pfam:pfam02837 Glycosyl hydrolases family 2, sugar binding domain. | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | 0.486 |
AMP97999.1 | AMP97998.1 | AY601_1070 | AY601_1069 | Hypothetical protein; Pfam:pfam01979 Amidohydrolase family. | Pfam:pfam02837 Glycosyl hydrolases family 2, sugar binding domain. | 0.773 |
AMP97999.1 | AMP98000.1 | AY601_1070 | AY601_1071 | Hypothetical protein; Pfam:pfam01979 Amidohydrolase family. | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | 0.486 |
AMP98000.1 | AMP97998.1 | AY601_1071 | AY601_1069 | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | Pfam:pfam02837 Glycosyl hydrolases family 2, sugar binding domain. | 0.486 |
AMP98000.1 | AMP97999.1 | AY601_1071 | AY601_1070 | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | Hypothetical protein; Pfam:pfam01979 Amidohydrolase family. | 0.486 |
AMP98000.1 | AMP99056.1 | AY601_1071 | AY601_2155 | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | TonB-dependent receptor; Pfam:pfam13715 Domain of unknown function (DUF4480). | 0.409 |
AMP98000.1 | AMP99221.1 | AY601_1071 | AY601_2327 | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | PKD domain-containing protein. | 0.509 |
AMP99056.1 | AMP98000.1 | AY601_2155 | AY601_1071 | TonB-dependent receptor; Pfam:pfam13715 Domain of unknown function (DUF4480). | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | 0.409 |
AMP99221.1 | AMP98000.1 | AY601_2327 | AY601_1071 | PKD domain-containing protein. | DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. | 0.509 |