Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMQ00170.1 | AMQ00171.1 | AY601_3299 | AY601_3300 | Thiol-disulfide oxidoreductase; Pfam:pfam04134 Protein of unknown function, DUF393. | PyrR protein; Pfam:pfam00156 Phosphoribosyl transferase domain. | 0.611 |
AMQ00170.1 | pyrB | AY601_3299 | AY601_3301 | Thiol-disulfide oxidoreductase; Pfam:pfam04134 Protein of unknown function, DUF393. | Pfam:pfam00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.609 |
AMQ00171.1 | AMQ00170.1 | AY601_3300 | AY601_3299 | PyrR protein; Pfam:pfam00156 Phosphoribosyl transferase domain. | Thiol-disulfide oxidoreductase; Pfam:pfam04134 Protein of unknown function, DUF393. | 0.611 |
AMQ00171.1 | pyrB | AY601_3300 | AY601_3301 | PyrR protein; Pfam:pfam00156 Phosphoribosyl transferase domain. | Pfam:pfam00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.993 |
pyrB | AMQ00170.1 | AY601_3301 | AY601_3299 | Pfam:pfam00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Thiol-disulfide oxidoreductase; Pfam:pfam04134 Protein of unknown function, DUF393. | 0.609 |
pyrB | AMQ00171.1 | AY601_3301 | AY601_3300 | Pfam:pfam00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | PyrR protein; Pfam:pfam00156 Phosphoribosyl transferase domain. | 0.993 |