STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMQ00930.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
AMQ00929.1
Hypothetical protein.
       0.671
AMQ00931.1
Hypothetical protein.
       0.586
AMQ00932.1
Hypothetical protein.
       0.483
AMQ00933.1
Hypothetical protein.
       0.483
AMQ00934.1
Hypothetical protein.
       0.483
AMQ00935.1
Hypothetical protein.
       0.483
AMQ00936.1
Putative head protein.
       0.483
AMQ00937.1
Hypothetical protein.
       0.427
AMQ00938.1
Hypothetical protein.
       0.422
Your Current Organism:
Pedobacter cryoconitis
NCBI taxonomy Id: 188932
Other names: DSM 14825, LMG 21415, LMG:21415, P. cryoconitis, Pedobacter cryoconitis Margesin et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.