Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_0868 | ssuB | MA_0868 | MA_0063 | Multidrug ABC transporter, ATP-binding protein. | Sulfonate ABC transporter, ATP-binding protein. | 0.814 |
MA_1658 | MA_2894 | MA_1658 | MA_2894 | Glutaredoxin. | Phosphoadenosine phosphosulfate reductase. | 0.712 |
MA_1658 | proW | MA_1658 | MA_2146 | Glutaredoxin. | Glycine betaine/L-proline ABC transporter, permease. | 0.638 |
MA_1658 | ssuA | MA_1658 | MA_0065 | Glutaredoxin. | Sulfonate ABC transporter, solute-binding protein. | 0.616 |
MA_1658 | ssuB | MA_1658 | MA_0063 | Glutaredoxin. | Sulfonate ABC transporter, ATP-binding protein. | 0.554 |
MA_1658 | ssuC | MA_1658 | MA_0064 | Glutaredoxin. | Sulfonate ABC transporter, permease protein. | 0.568 |
MA_2894 | MA_1658 | MA_2894 | MA_1658 | Phosphoadenosine phosphosulfate reductase. | Glutaredoxin. | 0.712 |
MA_2894 | MA_3471 | MA_2894 | MA_3471 | Phosphoadenosine phosphosulfate reductase. | Hypothetical protein (multi-domain). | 0.593 |
MA_2894 | proW | MA_2894 | MA_2146 | Phosphoadenosine phosphosulfate reductase. | Glycine betaine/L-proline ABC transporter, permease. | 0.655 |
MA_2894 | ssuA | MA_2894 | MA_0065 | Phosphoadenosine phosphosulfate reductase. | Sulfonate ABC transporter, solute-binding protein. | 0.834 |
MA_2894 | ssuB | MA_2894 | MA_0063 | Phosphoadenosine phosphosulfate reductase. | Sulfonate ABC transporter, ATP-binding protein. | 0.851 |
MA_2894 | ssuC | MA_2894 | MA_0064 | Phosphoadenosine phosphosulfate reductase. | Sulfonate ABC transporter, permease protein. | 0.797 |
MA_3471 | MA_2894 | MA_3471 | MA_2894 | Hypothetical protein (multi-domain). | Phosphoadenosine phosphosulfate reductase. | 0.593 |
MA_3471 | ssuA | MA_3471 | MA_0065 | Hypothetical protein (multi-domain). | Sulfonate ABC transporter, solute-binding protein. | 0.831 |
MA_3471 | ssuB | MA_3471 | MA_0063 | Hypothetical protein (multi-domain). | Sulfonate ABC transporter, ATP-binding protein. | 0.789 |
MA_3471 | ssuC | MA_3471 | MA_0064 | Hypothetical protein (multi-domain). | Sulfonate ABC transporter, permease protein. | 0.840 |
gatA | ssuA | MA_4523 | MA_0065 | glutamyl-tRNA (Gln) amidotransferase, subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | Sulfonate ABC transporter, solute-binding protein. | 0.431 |
gatA | ssuB | MA_4523 | MA_0063 | glutamyl-tRNA (Gln) amidotransferase, subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | Sulfonate ABC transporter, ATP-binding protein. | 0.623 |
mer | ssuA | MA_3733 | MA_0065 | F420-dependent N5,N10-methylene-tetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. | Sulfonate ABC transporter, solute-binding protein. | 0.720 |
mer | ssuB | MA_3733 | MA_0063 | F420-dependent N5,N10-methylene-tetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. | Sulfonate ABC transporter, ATP-binding protein. | 0.714 |
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