STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_0100Nucleotidyltransferase. (106 aa)    
Predicted Functional Partners:
MA_0101
Conserved hypothetical protein; Belongs to the UPF0331 family.
 
  
 0.901
MA_0102
Nucleotidyltransferase.
 
    
0.676
MA_2130
Conserved hypothetical protein.
 
  
 0.599
MA_1296
Conserved hypothetical protein; Belongs to the UPF0331 family.
 
  
 0.574
MA_0767
Conserved hypothetical protein.
 
  
 0.554
MA_0099
Conserved hypothetical protein.
       0.407
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.