Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MA_0282Sulfate/molybdate ABC transporter, ATP-binding protein. (348 aa)    
Predicted Functional Partners:
MA_0281
Sulfate/molybdate ABC transporter, permease protein.
 
 0.998
MA_0280
Sulfate/molybdate ABC transporter, solute-binding protein; Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily.
 
  
  0.937
modA
Molybdenum-binding protein.
       0.778
MA_3358
iron(III) ABC transporter, ATP-binding protein.
 
 
0.636
modB
Molybdenum ABC transporter, permease protein.
 
  
 0.621
MA_4606
iron(III) ABC transporter, ATP-binding protein.
 
 
 
0.612
fecE
Fe(III) dicitrate ABC transporter, ATP-binding protein.
 
 
 
0.604
MA_3453
Iron ABC transporter, ATP-binding protein.
 
 
 
0.604
MA_2776
iron(III) ABC transporter, ATP-binding protein.
 
 
 
0.602
MA_1132
Iron ABC transporter, ATP-binding protein.
 
 
 
0.598
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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