Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
modA-2Molybdenum ABC transporter, solute-binding protein. (271 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter, permease protein.
 
 0.997
modC
Molybdenum ABC transporter, ATP-binding protein.
 
  
  0.986
modB-2
Molybdate ABC transporter, permease protein.
 
 
 0.963
modB-3
Molybdenum ABC transporter, permease protein.
 
 
 0.963
modB-4
Molybdenum ABC transporter, permease protein.
 
 
 0.962
MA_0281
Sulfate/molybdate ABC transporter, permease protein.
 
 
 0.925
modA-3
Molybdate ABC transporter, solute-binding protein.
 
  
 
0.919
modA-4
Molybdenum ABC transporter, solute-binding protein.
 
  
 
0.919
modC-3
Molydbenum ABC transporter, ATP-binding protein.
 
  
  0.838
modC-2
Molybdate ABC transporter, ATP-binding protein.
 
  
  0.837
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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