Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_0361 | MA_0362 | MA_0361 | MA_0362 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.509 |
MA_0362 | MA_0361 | MA_0362 | MA_0361 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.509 |
MA_0362 | MA_0363 | MA_0362 | MA_0363 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
MA_0362 | MA_1949 | MA_0362 | MA_1949 | Conserved hypothetical protein. | Glutamate decarboxylase. | 0.423 |
MA_0362 | MA_2283 | MA_0362 | MA_2283 | Conserved hypothetical protein. | Isochorismatase. | 0.447 |
MA_0362 | MA_2629 | MA_0362 | MA_2629 | Conserved hypothetical protein. | Triacylglycerol lipase. | 0.403 |
MA_0362 | MA_3259 | MA_0362 | MA_3259 | Conserved hypothetical protein. | Serine/threonine specific protein phosphatase. | 0.815 |
MA_0362 | MA_4202 | MA_0362 | MA_4202 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.815 |
MA_0362 | MA_4411 | MA_0362 | MA_4411 | Conserved hypothetical protein. | Isochorismatase. | 0.408 |
MA_0362 | alkA | MA_0362 | MA_3207 | Conserved hypothetical protein. | DNA-3-methyladenine glycosylase II. | 0.445 |
MA_0362 | ndh | MA_0362 | MA_4636 | Conserved hypothetical protein. | NADH dehydrogenase. | 0.717 |
MA_0363 | MA_0362 | MA_0363 | MA_0362 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
MA_1949 | MA_0362 | MA_1949 | MA_0362 | Glutamate decarboxylase. | Conserved hypothetical protein. | 0.423 |
MA_1949 | MA_2283 | MA_1949 | MA_2283 | Glutamate decarboxylase. | Isochorismatase. | 0.474 |
MA_1949 | MA_4411 | MA_1949 | MA_4411 | Glutamate decarboxylase. | Isochorismatase. | 0.470 |
MA_2283 | MA_0362 | MA_2283 | MA_0362 | Isochorismatase. | Conserved hypothetical protein. | 0.447 |
MA_2283 | MA_1949 | MA_2283 | MA_1949 | Isochorismatase. | Glutamate decarboxylase. | 0.474 |
MA_2629 | MA_0362 | MA_2629 | MA_0362 | Triacylglycerol lipase. | Conserved hypothetical protein. | 0.403 |
MA_3259 | MA_0362 | MA_3259 | MA_0362 | Serine/threonine specific protein phosphatase. | Conserved hypothetical protein. | 0.815 |
MA_4202 | MA_0362 | MA_4202 | MA_0362 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.815 |
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