Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MA_0504Transcriptional regulator, ArsR family. (180 aa)    
Predicted Functional Partners:
mttC-2
Trimethylamine corrinoid protein; Acts probably as a methyl group carrier between MttB and either MtbA or MtaA.
     
 0.720
mttC
Trimethylamine corrinoid protein; Acts probably as a methyl group carrier between MttB and either MtbA or MtaA.
     
 0.623
mtaC2
Methanol-5-hydroxybenzimidazolylcobamide co-methyltransferase, isozyme 2.
     
 0.612
mtbC-2
Dimethylamine corrinoid protein; Acts as a methyl group carrier between MtbB and MtbA. Belongs to the methylamine corrinoid protein family.
     
 0.523
mtbC-3
Dimethylamine corrinoid protein; Acts as a methyl group carrier between MtbB and MtbA. Belongs to the methylamine corrinoid protein family.
     
 0.523
mtaC1
Methanol-5-hydroxybenzimidazolylcobamide co-methyltransferase, isozyme 1.
     
 0.522
mtbC
Dimethylamine corrinoid protein; Acts as a methyl group carrier between MtbB and MtbA. Belongs to the methylamine corrinoid protein family.
     
 0.522
MA_0505
Predicted protein.
       0.519
MA_0503
Predicted protein.
       0.508
MA_0506
Predicted protein.
       0.503
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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