Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_0639 | MA_0965 | MA_0639 | MA_0965 | Rubrerythrin. | Thioredoxin. | 0.527 |
MA_0639 | MA_1659 | MA_0639 | MA_1659 | Rubrerythrin. | Rubredoxin. | 0.614 |
MA_0639 | MA_3429 | MA_0639 | MA_3429 | Rubrerythrin. | Conserved hypothetical protein. | 0.550 |
MA_0639 | MA_3702 | MA_0639 | MA_3702 | Rubrerythrin. | Thioredoxin. | 0.514 |
MA_0639 | MA_3737 | MA_0639 | MA_3737 | Rubrerythrin. | Desulfoferrodoxin. | 0.554 |
MA_0639 | MA_3938 | MA_0639 | MA_3938 | Rubrerythrin. | Conserved hypothetical protein; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. | 0.514 |
MA_0639 | ahpC | MA_0639 | MA_4103 | Rubrerythrin. | Peroxiredoxin (alkyl hydroperoxide reductase); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.541 |
MA_0639 | fprA | MA_0639 | MA_3381 | Rubrerythrin. | Flavoprotein. | 0.873 |
MA_0639 | fprA-2 | MA_0639 | MA_3743 | Rubrerythrin. | Flavoprotein A. | 0.863 |
MA_0639 | trx | MA_0639 | MA_3212 | Rubrerythrin. | Thioredoxin. | 0.797 |
MA_0965 | MA_0639 | MA_0965 | MA_0639 | Thioredoxin. | Rubrerythrin. | 0.527 |
MA_0965 | MA_1659 | MA_0965 | MA_1659 | Thioredoxin. | Rubredoxin. | 0.625 |
MA_0965 | MA_3702 | MA_0965 | MA_3702 | Thioredoxin. | Thioredoxin. | 0.544 |
MA_0965 | ahpC | MA_0965 | MA_4103 | Thioredoxin. | Peroxiredoxin (alkyl hydroperoxide reductase); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.920 |
MA_0965 | fprA | MA_0965 | MA_3381 | Thioredoxin. | Flavoprotein. | 0.517 |
MA_0965 | fprA-2 | MA_0965 | MA_3743 | Thioredoxin. | Flavoprotein A. | 0.517 |
MA_0965 | trx | MA_0965 | MA_3212 | Thioredoxin. | Thioredoxin. | 0.493 |
MA_1659 | MA_0639 | MA_1659 | MA_0639 | Rubredoxin. | Rubrerythrin. | 0.614 |
MA_1659 | MA_0965 | MA_1659 | MA_0965 | Rubredoxin. | Thioredoxin. | 0.625 |
MA_1659 | MA_3702 | MA_1659 | MA_3702 | Rubredoxin. | Thioredoxin. | 0.625 |
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