Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fwuDFormylmethanofuran dehydrogenase, subunit D. (127 aa)    
Predicted Functional Partners:
fwdG-2
Tungsten formylmethanofuran dehydrogenase, subunit G.
 
 
 0.993
MA_2867
Polyferredoxin.
 
 
 0.990
fwdB
Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.976
fwdA
Formylmethanofuran dehydrogenase, subunit A.
 
 
 0.973
fmdA
Formylmethanofuran dehydrogenase, subunit A.
 
 
 0.932
fmdA-2
Formylmethanofuran dehydrogenase, subunit A.
 
 
 0.931
fmdB
Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.927
fmdB-3
Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.926
fmdB-2
Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.921
fwdC
Formylmethanofuran dehydrogenase, subunit C.
 
  
 0.914
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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