STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_0903HesB family protein. (105 aa)    
Predicted Functional Partners:
MA_0936
Conserved hypothetical protein.
  
 
 0.799
MA_4407
Conserved hypothetical protein.
  
 
 0.799
sufC
ABC transporter, ATP-binding protein.
  
 
 0.796
MA_4406
ABC transporter, ATP-binding protein.
  
 
 0.796
MA_0807
NifU family protein.
  
  
 0.788
MA_2717
NifU protein.
  
  
 0.788
nifU
Nitrogen fixation protein.
  
  
 0.788
MA_2540
Phycocyanin alpha phycocyanobilin lyase related protein.
   
 
 0.770
MA_2807
Hypothetical protein (multi-domain).
   
 
 0.770
cpcE
Phycocyanin alpha phycocyanobilin lyase.
   
 
 0.770
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.