STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MA_1027Predicted protein. (81 aa)    
Predicted Functional Partners:
MA_1029
Hypothetical protein (multi-domain).
 
     0.823
MA_1028
Long-chain fatty-acid-CoA ligase.
 
     0.811
MA_1030
NAD(+) synthase (glutamine-hydrolyzing); Belongs to the NAD synthetase family.
 
     0.745
MA_3042
Predicted protein.
  
     0.528
MA_2347
Predicted protein.
  
     0.518
MA_2344
Predicted protein.
  
     0.499
MA_0159
Predicted protein.
  
     0.453
MA_2241
Predicted protein.
  
     0.434
MA_1031
Conserved hypothetical protein.
 
     0.433
MA_1026
Predicted protein.
       0.430
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.