Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MA_1176Polysaccharide ABC transporter, permease protein. (260 aa)    
Predicted Functional Partners:
MA_1177
Polysaccharide ABC transporter, ATP-binding protein.
 
 0.999
MA_1175
Mannosyltransferase.
 
  
 0.877
MA_1178
Conserved hypothetical protein.
 
     0.858
MA_1179
Glycosyltransferase.
 
  
 0.836
MA_1180
Hexosyltransferase.
 
     0.791
MA_3758
Rhamnosyl transferase.
 
  
 0.718
MA_2170
Glycosyltransferase.
 
  
 0.715
gmd-2
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.572
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.564
MA_2169
Dolichyl-phosphate beta-D-mannosyltransferase.
 
  
 0.553
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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