Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_3020 | trkA2 | MA_3020 | MA_1482 | Conserved hypothetical protein. | Potassium uptake protein. | 0.791 |
MA_3020 | trkH | MA_3020 | MA_1481 | Conserved hypothetical protein. | Sodium transport protein. | 0.992 |
MA_3020 | trkH-2 | MA_3020 | MA_1483 | Conserved hypothetical protein. | Sodium transport protein. | 0.992 |
MA_3020 | trkH-3 | MA_3020 | MA_2209 | Conserved hypothetical protein. | Trk potassium uptake system protein, transmembrane component H. | 0.993 |
ribE | trkA2 | MA_1818 | MA_1482 | Riboflavin synthase, subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Potassium uptake protein. | 0.745 |
trkA | trkA2 | MA_2210 | MA_1482 | Trk potassium uptake system protein; Peripheral membrane protein A. | Potassium uptake protein. | 0.408 |
trkA | trkH | MA_2210 | MA_1481 | Trk potassium uptake system protein; Peripheral membrane protein A. | Sodium transport protein. | 0.959 |
trkA | trkH-2 | MA_2210 | MA_1483 | Trk potassium uptake system protein; Peripheral membrane protein A. | Sodium transport protein. | 0.959 |
trkA | trkH-3 | MA_2210 | MA_2209 | Trk potassium uptake system protein; Peripheral membrane protein A. | Trk potassium uptake system protein, transmembrane component H. | 0.977 |
trkA2 | MA_3020 | MA_1482 | MA_3020 | Potassium uptake protein. | Conserved hypothetical protein. | 0.791 |
trkA2 | ribE | MA_1482 | MA_1818 | Potassium uptake protein. | Riboflavin synthase, subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.745 |
trkA2 | trkA | MA_1482 | MA_2210 | Potassium uptake protein. | Trk potassium uptake system protein; Peripheral membrane protein A. | 0.408 |
trkA2 | trkH | MA_1482 | MA_1481 | Potassium uptake protein. | Sodium transport protein. | 0.927 |
trkA2 | trkH-2 | MA_1482 | MA_1483 | Potassium uptake protein. | Sodium transport protein. | 0.969 |
trkA2 | trkH-3 | MA_1482 | MA_2209 | Potassium uptake protein. | Trk potassium uptake system protein, transmembrane component H. | 0.925 |
trkH | MA_3020 | MA_1481 | MA_3020 | Sodium transport protein. | Conserved hypothetical protein. | 0.992 |
trkH | trkA | MA_1481 | MA_2210 | Sodium transport protein. | Trk potassium uptake system protein; Peripheral membrane protein A. | 0.959 |
trkH | trkA2 | MA_1481 | MA_1482 | Sodium transport protein. | Potassium uptake protein. | 0.927 |
trkH-2 | MA_3020 | MA_1483 | MA_3020 | Sodium transport protein. | Conserved hypothetical protein. | 0.992 |
trkH-2 | trkA | MA_1483 | MA_2210 | Sodium transport protein. | Trk potassium uptake system protein; Peripheral membrane protein A. | 0.959 |
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