Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_0705 | MA_1355 | MA_0705 | MA_1355 | Aldehyde dehydrogenase. | Aldehyde dehydrogenase. | 0.901 |
MA_0705 | MA_1725 | MA_0705 | MA_1725 | Aldehyde dehydrogenase. | phenylacetate-CoA ligase. | 0.765 |
MA_1355 | MA_0705 | MA_1355 | MA_0705 | Aldehyde dehydrogenase. | Aldehyde dehydrogenase. | 0.901 |
MA_1355 | MA_1725 | MA_1355 | MA_1725 | Aldehyde dehydrogenase. | phenylacetate-CoA ligase. | 0.765 |
MA_1725 | MA_0705 | MA_1725 | MA_0705 | phenylacetate-CoA ligase. | Aldehyde dehydrogenase. | 0.765 |
MA_1725 | MA_1355 | MA_1725 | MA_1355 | phenylacetate-CoA ligase. | Aldehyde dehydrogenase. | 0.765 |
MA_1725 | MA_3854 | MA_1725 | MA_3854 | phenylacetate-CoA ligase. | Acetolactate synthase, small subunit. | 0.594 |
MA_1725 | aldH | MA_1725 | MA_2860 | phenylacetate-CoA ligase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.765 |
MA_1725 | aldH6 | MA_1725 | MA_4079 | phenylacetate-CoA ligase. | Aldehyde dehydrogenase (NAD(P)+). | 0.765 |
MA_1725 | iorA | MA_1725 | MA_1727 | phenylacetate-CoA ligase. | Indolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.849 |
MA_1725 | iorB | MA_1725 | MA_1726 | phenylacetate-CoA ligase. | Indolepyruvate oxidoreductase, subunit beta. | 0.857 |
MA_1725 | paaI | MA_1725 | MA_0735 | phenylacetate-CoA ligase. | Phenylacetic acid degradation protein. | 0.621 |
MA_3854 | MA_1725 | MA_3854 | MA_1725 | Acetolactate synthase, small subunit. | phenylacetate-CoA ligase. | 0.594 |
MA_3854 | iorA | MA_3854 | MA_1727 | Acetolactate synthase, small subunit. | Indolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.524 |
MA_3854 | iorB | MA_3854 | MA_1726 | Acetolactate synthase, small subunit. | Indolepyruvate oxidoreductase, subunit beta. | 0.518 |
aldH | MA_1725 | MA_2860 | MA_1725 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | phenylacetate-CoA ligase. | 0.765 |
aldH6 | MA_1725 | MA_4079 | MA_1725 | Aldehyde dehydrogenase (NAD(P)+). | phenylacetate-CoA ligase. | 0.765 |
iorA | MA_1725 | MA_1727 | MA_1725 | Indolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | phenylacetate-CoA ligase. | 0.849 |
iorA | MA_3854 | MA_1727 | MA_3854 | Indolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Acetolactate synthase, small subunit. | 0.524 |
iorA | iorB | MA_1727 | MA_1726 | Indolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Indolepyruvate oxidoreductase, subunit beta. | 0.975 |
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