Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_1895 | MA_1896 | MA_1895 | MA_1896 | Predicted protein. | Predicted protein. | 0.422 |
MA_1896 | MA_1895 | MA_1896 | MA_1895 | Predicted protein. | Predicted protein. | 0.422 |
MA_1896 | MA_1897 | MA_1896 | MA_1897 | Predicted protein. | Predicted protein. | 0.697 |
MA_1896 | MA_1898 | MA_1896 | MA_1898 | Predicted protein. | Predicted protein. | 0.403 |
MA_1896 | flaH | MA_1896 | MA_3057 | Predicted protein. | Flagella accessory protein H. | 0.526 |
MA_1896 | flaH-2 | MA_1896 | MA_3081 | Predicted protein. | Flagella accessory protein H. | 0.526 |
MA_1896 | flaI | MA_1896 | MA_3056 | Predicted protein. | Flagella accessory protein I. | 0.529 |
MA_1896 | flaI-2 | MA_1896 | MA_3082 | Predicted protein. | Flagella accessory protein I. | 0.529 |
MA_1896 | flaJ | MA_1896 | MA_3055 | Predicted protein. | Flagella accessory protein J. | 0.489 |
MA_1896 | flaJ-2 | MA_1896 | MA_3083 | Predicted protein. | Flagella accessory protein J. | 0.489 |
MA_1897 | MA_1896 | MA_1897 | MA_1896 | Predicted protein. | Predicted protein. | 0.697 |
MA_1897 | MA_1898 | MA_1897 | MA_1898 | Predicted protein. | Predicted protein. | 0.440 |
MA_1898 | MA_1896 | MA_1898 | MA_1896 | Predicted protein. | Predicted protein. | 0.403 |
MA_1898 | MA_1897 | MA_1898 | MA_1897 | Predicted protein. | Predicted protein. | 0.440 |
flaH | MA_1896 | MA_3057 | MA_1896 | Flagella accessory protein H. | Predicted protein. | 0.526 |
flaH | flaI | MA_3057 | MA_3056 | Flagella accessory protein H. | Flagella accessory protein I. | 0.987 |
flaH | flaI-2 | MA_3057 | MA_3082 | Flagella accessory protein H. | Flagella accessory protein I. | 0.951 |
flaH | flaJ | MA_3057 | MA_3055 | Flagella accessory protein H. | Flagella accessory protein J. | 0.988 |
flaH | flaJ-2 | MA_3057 | MA_3083 | Flagella accessory protein H. | Flagella accessory protein J. | 0.965 |
flaH-2 | MA_1896 | MA_3081 | MA_1896 | Flagella accessory protein H. | Predicted protein. | 0.526 |
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