STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_1936Hypothetical protein (multi-domain). (1078 aa)    
Predicted Functional Partners:
MA_1934
Conserved hypothetical protein.
       0.725
MA_1933
Conserved hypothetical protein.
       0.724
MA_1935
Conserved hypothetical protein.
       0.722
MA_1932
Predicted protein.
       0.719
MA_1931
Conserved hypothetical protein.
       0.700
MA_1937
Carbon-nitrogen hydrolase.
      
0.689
MA_2526
Beta/gama crystallin family protein.
  
     0.649
MA_1165
Conserved hypothetical protein.
  
     0.560
MA_4674
Metalloproteinase domain.
  
     0.551
MA_1930
Transposase.
       0.515
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.