Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MA_1839 | MA_1970 | Hypothetical protein (multi-domain). | Conserved hypothetical protein. | 0.432 |
MA_1839 | MA_2239 | Hypothetical protein (multi-domain). | Hypothetical protein (multi-domain). | 0.431 |
MA_1839 | MA_3893 | Hypothetical protein (multi-domain). | Conserved hypothetical protein. | 0.437 |
MA_1839 | MA_4611 | Hypothetical protein (multi-domain). | Hypothetical protein (multi-domain). | 0.446 |
MA_1968 | MA_1969 | Conserved hypothetical protein. | Serine-type D-Ala-D-Ala carboxypeptidase. | 0.521 |
MA_1968 | MA_1970 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.421 |
MA_1968 | MA_3893 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.622 |
MA_1969 | MA_1968 | Serine-type D-Ala-D-Ala carboxypeptidase. | Conserved hypothetical protein. | 0.521 |
MA_1969 | MA_1970 | Serine-type D-Ala-D-Ala carboxypeptidase. | Conserved hypothetical protein. | 0.580 |
MA_1970 | MA_1839 | Conserved hypothetical protein. | Hypothetical protein (multi-domain). | 0.432 |
MA_1970 | MA_1968 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.421 |
MA_1970 | MA_1969 | Conserved hypothetical protein. | Serine-type D-Ala-D-Ala carboxypeptidase. | 0.580 |
MA_1970 | MA_1971 | Conserved hypothetical protein. | Predicted protein. | 0.428 |
MA_1970 | MA_2239 | Conserved hypothetical protein. | Hypothetical protein (multi-domain). | 0.484 |
MA_1970 | MA_3275 | Conserved hypothetical protein. | Hypothetical protein (multi-domain). | 0.446 |
MA_1970 | MA_3612 | Conserved hypothetical protein. | Hypothetical protein (multi-domain). | 0.408 |
MA_1970 | MA_3893 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.637 |
MA_1970 | MA_4596 | Conserved hypothetical protein. | Hypothetical protein (multi-domain). | 0.404 |
MA_1970 | MA_4611 | Conserved hypothetical protein. | Hypothetical protein (multi-domain). | 0.441 |
MA_1971 | MA_1970 | Predicted protein. | Conserved hypothetical protein. | 0.428 |
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