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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorIndolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (558 aa)    
Predicted Functional Partners:
MA_1023
Indolepyruvate ferredoxin oxidoreductase, subunit beta.
 
 0.888
iorB
Indolepyruvate oxidoreductase, subunit beta.
 
 
 0.884
MA_1981
Conserved hypothetical protein.
       0.735
MA_3471
Hypothetical protein (multi-domain).
     
 0.653
vorA
2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit.
 
 
 0.619
porG
Pyruvate synthase, subunit gamma.
  
 
 0.549
MA_3854
Acetolactate synthase, small subunit.
 
    0.513
vorB
2-oxoisovalerate ferredoxin oxidoreductase, beta subunit.
 
  
 0.406
isf-11
Iron-sulfur flavoprotein.
  
    0.402
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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